Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
DffaO54786 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.52□□□□□ -0.4
DffaO54786 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
DffaO54786 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
DffaO54786 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DffaO54786 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
DffaO54786 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.52□□□□□ -0.41
DffaO54786 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.52□□□□□ -0.41
DffaO54786 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.52□□□□□ -0.41
DffaO54786 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.52□□□□□ -0.41
DffaO54786 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.52□□□□□ -0.41
DffaO54786 Gm14381-201ENSMUST00000122105 414 ntBASIC12.52□□□□□ -0.41
DffaO54786 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.52□□□□□ -0.41
DffaO54786 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.52□□□□□ -0.41
DffaO54786 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.52□□□□□ -0.41
DffaO54786 Gm5706-201ENSMUST00000181525 993 ntBASIC12.52□□□□□ -0.41
DffaO54786 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.52□□□□□ -0.41
DffaO54786 Gm45331-201ENSMUST00000209868 554 ntBASIC12.52□□□□□ -0.41
DffaO54786 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.52□□□□□ -0.41
DffaO54786 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
DffaO54786 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.52□□□□□ -0.41
DffaO54786 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.52□□□□□ -0.41
DffaO54786 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.52□□□□□ -0.41
DffaO54786 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
DffaO54786 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
DffaO54786 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.51□□□□□ -0.41
DffaO54786 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.51□□□□□ -0.41
DffaO54786 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gm24255-201ENSMUST00000104481 128 ntBASIC12.51□□□□□ -0.41
DffaO54786 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
DffaO54786 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gm15610-201ENSMUST00000120584 195 ntBASIC12.51□□□□□ -0.41
DffaO54786 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Mir1938-201ENSMUST00000158746 100 ntBASIC12.51□□□□□ -0.41
DffaO54786 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.51□□□□□ -0.41
DffaO54786 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
DffaO54786 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
DffaO54786 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DffaO54786 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
DffaO54786 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
DffaO54786 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
DffaO54786 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.5□□□□□ -0.41
DffaO54786 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.5□□□□□ -0.41
DffaO54786 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.5□□□□□ -0.41
DffaO54786 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.5□□□□□ -0.41
DffaO54786 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
DffaO54786 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DffaO54786 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
DffaO54786 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
DffaO54786 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms