Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 AL109954.1-202ENST00000564051 2148 ntBASIC12.97□□□□□ -0.33
GCM1Q9NP62 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GCM1Q9NP62 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
GCM1Q9NP62 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AL158070.2-201ENST00000623713 1621 ntBASIC12.96□□□□□ -0.33
GCM1Q9NP62 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AC093433.1-201ENST00000458048 571 ntBASIC12.96□□□□□ -0.33
GCM1Q9NP62 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.96□□□□□ -0.33
GCM1Q9NP62 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GCM1Q9NP62 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.96□□□□□ -0.34
GCM1Q9NP62 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.96□□□□□ -0.34
GCM1Q9NP62 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.96□□□□□ -0.34
GCM1Q9NP62 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GCM1Q9NP62 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GCM1Q9NP62 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 AC114812.1-204ENST00000449669 728 ntBASIC12.95□□□□□ -0.34
GCM1Q9NP62 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GCM1Q9NP62 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms