Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.62□□□□□ -0.39
Ddx56Q9D0R4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Gm5455-201ENSMUST00000058710 715 ntBASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Olfr582-201ENSMUST00000098212 960 ntBASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ddx56Q9D0R4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm27320-201ENSMUST00000184892 109 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm4607-201ENSMUST00000206649 577 ntBASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.6□□□□□ -0.39
Ddx56Q9D0R4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms