Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gm7857-201ENSMUST00000117957 358 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tlr3Q99MB1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Gm18893-201ENSMUST00000198416 943 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Gm43378-201ENSMUST00000199336 582 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Gm8385-201ENSMUST00000058999 643 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Pck2-205ENSMUST00000226352 2784 ntBASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.88□□□□□ -0.35
Tlr3Q99MB1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tlr3Q99MB1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms