Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 RPS9P1-201ENST00000419943 583 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 RTN3P1-201ENST00000536295 711 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 RN7SL163P-201ENST00000583100 276 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC018635.2-201ENST00000608625 364 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AHCYP4-201ENST00000419201 1315 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC015688.4-201ENST00000580780 1647 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 LINC00554-201ENST00000564841 3011 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 OR2K2-202ENST00000374428 1038 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC090857.1-201ENST00000527400 390 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 NAP1L6-202ENST00000641404 1222 ntBASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CDK5RAP2Q96SN8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 RPL17P45-201ENST00000586289 509 ntBASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AC009145.4-201ENST00000625119 1294 ntBASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 AC009093.10-201ENST00000641956 1442 ntBASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDK5RAP2Q96SN8 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AC018529.2-202ENST00000611482 3087 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 PGAM1P5-201ENST00000548011 764 ntBASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDK5RAP2Q96SN8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms