Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Gm43962-201ENSMUST00000203898 190 ntBASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Gm8956-201ENSMUST00000203939 825 ntBASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb1Q91Y08 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm13296-201ENSMUST00000117854 997 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm6114-201ENSMUST00000182472 968 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb1Q91Y08 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms