Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc38Q8CDN8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Mir7085-201ENSMUST00000184353 66 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gm37489-201ENSMUST00000191883 159 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gm6013-201ENSMUST00000212264 699 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gm10608-202ENSMUST00000213924 676 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc38Q8CDN8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm15370-201ENSMUST00000117158 253 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm12164-201ENSMUST00000121695 551 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm17931-201ENSMUST00000208132 634 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm8712-201ENSMUST00000221090 701 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Cog3-203ENSMUST00000227473 4197 ntBASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc38Q8CDN8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc38Q8CDN8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms