Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Aph1bQ8C7N7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm8062-201ENSMUST00000139696 444 ntBASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Aph1bQ8C7N7 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm37489-201ENSMUST00000191883 159 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm38314-201ENSMUST00000195709 625 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm30285-201ENSMUST00000214614 422 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm8420-201ENSMUST00000097103 598 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Aph1bQ8C7N7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Aph1bQ8C7N7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms