Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm12928-201ENSMUST00000117115 573 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm12384-201ENSMUST00000119228 919 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Mir6392-201ENSMUST00000184924 108 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.85□□□□□ -0.83
Smco3Q8BQM7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm37042-201ENSMUST00000193816 581 ntBASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm44855-201ENSMUST00000205725 362 ntBASIC9.84□□□□□ -0.83
Smco3Q8BQM7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms