Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim50Q810I2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim50Q810I2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.69□□□□□ -0.54
Trim50Q810I2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim50Q810I2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm12036-201ENSMUST00000120008 530 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm5706-201ENSMUST00000181525 993 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm32999-201ENSMUST00000192693 562 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm44967-201ENSMUST00000207047 631 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm44651-201ENSMUST00000207343 372 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm17931-201ENSMUST00000208132 634 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm6082-201ENSMUST00000215204 454 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm9257-201ENSMUST00000221254 232 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim50Q810I2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.68□□□□□ -0.54
Trim50Q810I2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim50Q810I2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim50Q810I2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms