Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm29667-201ENSMUST00000190817 490 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm10531-201ENSMUST00000193527 2303 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.89□□□□□ -0.67
Ccbe1Q3MI99 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm18187-201ENSMUST00000196476 984 ntBASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ccbe1Q3MI99 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccbe1Q3MI99 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Ccbe1Q3MI99 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.87□□□□□ -0.67
Ccbe1Q3MI99 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccbe1Q3MI99 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms