Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.59□□□□□ -0.39
NcanP55066 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Gm38103-201ENSMUST00000191707 864 ntBASIC12.59□□□□□ -0.39
NcanP55066 Gm5190-201ENSMUST00000192434 357 ntBASIC12.59□□□□□ -0.39
NcanP55066 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
NcanP55066 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Gm44882-201ENSMUST00000205702 802 ntBASIC12.59□□□□□ -0.39
NcanP55066 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.59□□□□□ -0.39
NcanP55066 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Gm8181-201ENSMUST00000062242 669 ntBASIC12.59□□□□□ -0.39
NcanP55066 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
NcanP55066 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.59□□□□□ -0.39
NcanP55066 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
NcanP55066 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NcanP55066 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NcanP55066 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.58□□□□□ -0.39
NcanP55066 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NcanP55066 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
NcanP55066 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
NcanP55066 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NcanP55066 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.58□□□□□ -0.4
NcanP55066 Gm14497-201ENSMUST00000119537 580 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm12274-201ENSMUST00000120062 385 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm15610-201ENSMUST00000120584 195 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Gm25830-201ENSMUST00000158923 132 ntBASIC12.58□□□□□ -0.4
NcanP55066 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm24328-201ENSMUST00000175104 67 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.58□□□□□ -0.4
NcanP55066 Gm37365-201ENSMUST00000193109 409 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm44216-201ENSMUST00000203942 157 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm17825-201ENSMUST00000206836 794 ntBASIC12.58□□□□□ -0.4
NcanP55066 Gm9204-201ENSMUST00000212641 947 ntBASIC12.58□□□□□ -0.4
NcanP55066 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.58□□□□□ -0.4
NcanP55066 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Gm9791-201ENSMUST00000060997 447 ntBASIC12.58□□□□□ -0.4
NcanP55066 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NcanP55066 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.58□□□□□ -0.4
NcanP55066 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
NcanP55066 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NcanP55066 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NcanP55066 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NcanP55066 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NcanP55066 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms