Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
UbbP0CG49 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
UbbP0CG49 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
UbbP0CG49 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
UbbP0CG49 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm13736-201ENSMUST00000119272 253 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.44□□□□□ -0.74
UbbP0CG49 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
UbbP0CG49 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.44□□□□□ -0.74
UbbP0CG49 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
UbbP0CG49 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
UbbP0CG49 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
UbbP0CG49 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UbbP0CG49 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
UbbP0CG49 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
UbbP0CG49 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.43□□□□□ -0.74
UbbP0CG49 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
UbbP0CG49 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Gm27839-201ENSMUST00000184242 106 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Gm7561-201ENSMUST00000211203 886 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.43□□□□□ -0.74
UbbP0CG49 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 Gm6091-201ENSMUST00000098307 165 ntBASIC10.43□□□□□ -0.74
UbbP0CG49 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UbbP0CG49 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms