Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfaip1O70479 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Matn2-206ENSMUST00000228570 2798 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm25766-201ENSMUST00000104101 131 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm13600-201ENSMUST00000117949 744 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm44315-201ENSMUST00000203041 219 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm8342-201ENSMUST00000209839 757 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.61□□□□□ -0.39
Tnfaip1O70479 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfaip1O70479 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm5100-201ENSMUST00000195631 589 ntBASIC12.6□□□□□ -0.39
Tnfaip1O70479 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.6□□□□□ -0.39
Tnfaip1O70479 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.6□□□□□ -0.39
Tnfaip1O70479 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.6□□□□□ -0.39
Tnfaip1O70479 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.6□□□□□ -0.39
Tnfaip1O70479 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.6□□□□□ -0.39
Tnfaip1O70479 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfaip1O70479 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip1O70479 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tnfaip1O70479 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Tnfaip1O70479 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfaip1O70479 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 229.1 ms