Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.18□□□□□ -0.46
Limk2O54785 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.18□□□□□ -0.46
Limk2O54785 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Gm27627-201ENSMUST00000183644 150 ntBASIC12.18□□□□□ -0.46
Limk2O54785 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.18□□□□□ -0.46
Limk2O54785 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.18□□□□□ -0.46
Limk2O54785 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.18□□□□□ -0.46
Limk2O54785 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.18□□□□□ -0.46
Limk2O54785 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.18□□□□□ -0.46
Limk2O54785 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.18□□□□□ -0.46
Limk2O54785 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.18□□□□□ -0.46
Limk2O54785 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Limk2O54785 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Limk2O54785 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.18□□□□□ -0.46
Limk2O54785 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Limk2O54785 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.17□□□□□ -0.46
Limk2O54785 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm11511-201ENSMUST00000118146 540 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm23699-201ENSMUST00000158835 135 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Limk2O54785 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Gm37666-201ENSMUST00000194110 866 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.17□□□□□ -0.46
Limk2O54785 Gm4607-201ENSMUST00000206649 577 ntBASIC12.17□□□□□ -0.46
Limk2O54785 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.17□□□□□ -0.46
Limk2O54785 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.17□□□□□ -0.46
Limk2O54785 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Limk2O54785 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Limk2O54785 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Limk2O54785 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.16□□□□□ -0.46
Limk2O54785 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.16□□□□□ -0.46
Limk2O54785 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.16□□□□□ -0.46
Limk2O54785 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.16□□□□□ -0.46
Limk2O54785 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.16□□□□□ -0.46
Limk2O54785 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Limk2O54785 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Limk2O54785 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Limk2O54785 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms