Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb3S4R1G7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb3S4R1G7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
H2afb3S4R1G7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.5■□□□□ 0.55
H2afb3S4R1G7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb3S4R1G7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb3S4R1G7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb3S4R1G7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb3S4R1G7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb3S4R1G7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb3S4R1G7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
H2afb3S4R1G7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2afb3S4R1G7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb3S4R1G7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb3S4R1G7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb3S4R1G7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb3S4R1G7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb3S4R1G7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb3S4R1G7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms