Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Smarcb1Q9Z0H3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcb1Q9Z0H3 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Gm45417-201ENSMUST00000209533 758 ntBASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Smarcb1Q9Z0H3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcb1Q9Z0H3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.49■■□□□ 1.03
Smarcb1Q9Z0H3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Gm43530-201ENSMUST00000195920 274 ntBASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.48■■□□□ 1.03
Smarcb1Q9Z0H3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcb1Q9Z0H3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcb1Q9Z0H3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcb1Q9Z0H3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcb1Q9Z0H3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcb1Q9Z0H3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Gm43137-201ENSMUST00000198052 594 ntBASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcb1Q9Z0H3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms