Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cr1Q9Z0D9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cr1Q9Z0D9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cr1Q9Z0D9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cx3cr1Q9Z0D9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cx3cr1Q9Z0D9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cx3cr1Q9Z0D9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cx3cr1Q9Z0D9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Gm9806-201ENSMUST00000051080 552 ntBASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Cx3cr1Q9Z0D9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cx3cr1Q9Z0D9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cr1Q9Z0D9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Scarna2-201ENSMUST00000157560 414 ntBASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cr1Q9Z0D9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cr1Q9Z0D9 Gm16437-201ENSMUST00000025669 507 ntBASIC17.4■□□□□ 0.38
Cx3cr1Q9Z0D9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cr1Q9Z0D9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cr1Q9Z0D9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.39■□□□□ 0.38
Cx3cr1Q9Z0D9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cr1Q9Z0D9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms