Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp17Q9R0S3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp17Q9R0S3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp17Q9R0S3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp17Q9R0S3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp17Q9R0S3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp17Q9R0S3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.31■□□□□ 0.68
Mmp17Q9R0S3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.31■□□□□ 0.68
Mmp17Q9R0S3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Mmp17Q9R0S3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp17Q9R0S3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp17Q9R0S3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp17Q9R0S3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp17Q9R0S3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp17Q9R0S3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Mmp17Q9R0S3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp17Q9R0S3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.27■□□□□ 0.68
Mmp17Q9R0S3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp17Q9R0S3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp17Q9R0S3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp17Q9R0S3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp17Q9R0S3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp17Q9R0S3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp17Q9R0S3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Gm5874-201ENSMUST00000096101 508 ntBASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp17Q9R0S3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp17Q9R0S3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp17Q9R0S3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms