Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Herpud2Q9JJC9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Herpud2Q9JJC9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Herpud2Q9JJC9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herpud2Q9JJC9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.69■□□□□ 0.9
Herpud2Q9JJC9 Gm43530-201ENSMUST00000195920 274 ntBASIC20.69■□□□□ 0.9
Herpud2Q9JJC9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herpud2Q9JJC9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Herpud2Q9JJC9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Herpud2Q9JJC9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herpud2Q9JJC9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herpud2Q9JJC9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Herpud2Q9JJC9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Herpud2Q9JJC9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Gm8493-201ENSMUST00000196881 489 ntBASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Herpud2Q9JJC9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Herpud2Q9JJC9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.64■□□□□ 0.9
Herpud2Q9JJC9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Herpud2Q9JJC9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Herpud2Q9JJC9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herpud2Q9JJC9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.62■□□□□ 0.89
Herpud2Q9JJC9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.62■□□□□ 0.89
Herpud2Q9JJC9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Herpud2Q9JJC9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Herpud2Q9JJC9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Herpud2Q9JJC9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Herpud2Q9JJC9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms