Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rbfox1Q9JJ43 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rbfox1Q9JJ43 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rbfox1Q9JJ43 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rbfox1Q9JJ43 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rbfox1Q9JJ43 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rbfox1Q9JJ43 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rbfox1Q9JJ43 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rbfox1Q9JJ43 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rbfox1Q9JJ43 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.5■□□□□ 0.39
Rbfox1Q9JJ43 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rbfox1Q9JJ43 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox1Q9JJ43 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rbfox1Q9JJ43 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rbfox1Q9JJ43 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rbfox1Q9JJ43 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms