Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps35Q9EQH3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.64■□□□□ 0.89
Vps35Q9EQH3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Etf1-202ENSMUST00000180351 108 ntBASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps35Q9EQH3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vps35Q9EQH3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps35Q9EQH3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.6■□□□□ 0.89
Vps35Q9EQH3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Gm7417-201ENSMUST00000192950 473 ntBASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps35Q9EQH3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vps35Q9EQH3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Vps35Q9EQH3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vps35Q9EQH3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.58■□□□□ 0.89
Vps35Q9EQH3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.58■□□□□ 0.89
Vps35Q9EQH3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vps35Q9EQH3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Vps35Q9EQH3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.58■□□□□ 0.88
Vps35Q9EQH3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vps35Q9EQH3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vps35Q9EQH3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps35Q9EQH3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps35Q9EQH3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps35Q9EQH3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps35Q9EQH3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vps35Q9EQH3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps35Q9EQH3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps35Q9EQH3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps35Q9EQH3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps35Q9EQH3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 819.9 ms