Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.55■□□□□ 0.72
Otud1Q9CUB6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Otud1Q9CUB6 Gm12922-201ENSMUST00000120626 809 ntBASIC19.53■□□□□ 0.72
Otud1Q9CUB6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.53■□□□□ 0.72
Otud1Q9CUB6 Gm13241-201ENSMUST00000094493 780 ntBASIC19.53■□□□□ 0.72
Otud1Q9CUB6 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.53■□□□□ 0.72
Otud1Q9CUB6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Otud1Q9CUB6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Otud1Q9CUB6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Otud1Q9CUB6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Otud1Q9CUB6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Gm9870-201ENSMUST00000063874 645 ntBASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Otud1Q9CUB6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Otud1Q9CUB6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Otud1Q9CUB6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Otud1Q9CUB6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Golgb1-201ENSMUST00000023534 498 ntBASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.51■□□□□ 0.71
Otud1Q9CUB6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otud1Q9CUB6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otud1Q9CUB6 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.5■□□□□ 0.71
Otud1Q9CUB6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
Otud1Q9CUB6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otud1Q9CUB6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Otud1Q9CUB6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Otud1Q9CUB6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.49■□□□□ 0.71
Otud1Q9CUB6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Otud1Q9CUB6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Otud1Q9CUB6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otud1Q9CUB6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otud1Q9CUB6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Otud1Q9CUB6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Otud1Q9CUB6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Otud1Q9CUB6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Otud1Q9CUB6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms