Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cotl1Q9CQI6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cotl1Q9CQI6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cotl1Q9CQI6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cotl1Q9CQI6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cotl1Q9CQI6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cotl1Q9CQI6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cotl1Q9CQI6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Cotl1Q9CQI6 Gm28731-201ENSMUST00000185564 1569 ntBASIC16■□□□□ 0.15
Cotl1Q9CQI6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cotl1Q9CQI6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16■□□□□ 0.15
Cotl1Q9CQI6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cotl1Q9CQI6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cotl1Q9CQI6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cotl1Q9CQI6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.97■□□□□ 0.15
Cotl1Q9CQI6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Cotl1Q9CQI6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cotl1Q9CQI6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cotl1Q9CQI6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.95■□□□□ 0.14
Cotl1Q9CQI6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cotl1Q9CQI6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.93■□□□□ 0.14
Cotl1Q9CQI6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms