Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rnf111Q99ML9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20■□□□□ 0.79
Rnf111Q99ML9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rnf111Q99ML9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rnf111Q99ML9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf111Q99ML9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rnf111Q99ML9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf111Q99ML9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Gm5921-201ENSMUST00000075898 882 ntBASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf111Q99ML9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf111Q99ML9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf111Q99ML9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf111Q99ML9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf111Q99ML9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf111Q99ML9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf111Q99ML9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf111Q99ML9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf111Q99ML9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf111Q99ML9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf111Q99ML9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf111Q99ML9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf111Q99ML9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf111Q99ML9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms