Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb22Q91XZ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhb22Q91XZ8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhb22Q91XZ8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhb22Q91XZ8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
Pcdhb22Q91XZ8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhb22Q91XZ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhb22Q91XZ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhb22Q91XZ8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Pcdhb22Q91XZ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.21■■□□□ 1.47
Pcdhb22Q91XZ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Gm22238-201ENSMUST00000175222 88 ntBASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhb22Q91XZ8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Pcdhb22Q91XZ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.18■■□□□ 1.46
Pcdhb22Q91XZ8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdhb22Q91XZ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb22Q91XZ8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhb22Q91XZ8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Gm7143-201ENSMUST00000222811 859 ntBASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhb22Q91XZ8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhb22Q91XZ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Pcdhb22Q91XZ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb22Q91XZ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb22Q91XZ8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhb22Q91XZ8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.13■■□□□ 1.45
Pcdhb22Q91XZ8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb22Q91XZ8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb22Q91XZ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Pcdhb22Q91XZ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhb22Q91XZ8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhb22Q91XZ8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms