Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb17Q91VD8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb17Q91VD8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb17Q91VD8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb17Q91VD8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhb17Q91VD8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb17Q91VD8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb17Q91VD8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb17Q91VD8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb17Q91VD8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb17Q91VD8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb17Q91VD8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcdhb17Q91VD8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb17Q91VD8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb17Q91VD8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb17Q91VD8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb17Q91VD8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb17Q91VD8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb17Q91VD8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.35■■□□□ 1.01
Pcdhb17Q91VD8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb17Q91VD8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb17Q91VD8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb17Q91VD8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb17Q91VD8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.32■■□□□ 1
Pcdhb17Q91VD8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb17Q91VD8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb17Q91VD8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb17Q91VD8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb17Q91VD8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb17Q91VD8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb17Q91VD8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.28■■□□□ 1
Pcdhb17Q91VD8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdhb17Q91VD8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC21.28■■□□□ 1
Pcdhb17Q91VD8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms