Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4aQ8VEJ9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps4aQ8VEJ9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps4aQ8VEJ9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vps4aQ8VEJ9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4aQ8VEJ9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Serp2-204ENSMUST00000228055 705 ntBASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4aQ8VEJ9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Vps4aQ8VEJ9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4aQ8VEJ9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4aQ8VEJ9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4aQ8VEJ9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.85■□□□□ 0.77
Vps4aQ8VEJ9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.85■□□□□ 0.77
Vps4aQ8VEJ9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
Vps4aQ8VEJ9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.83■□□□□ 0.77
Vps4aQ8VEJ9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Vps4aQ8VEJ9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vps4aQ8VEJ9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4aQ8VEJ9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4aQ8VEJ9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vps4aQ8VEJ9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4aQ8VEJ9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.8■□□□□ 0.76
Vps4aQ8VEJ9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps4aQ8VEJ9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4aQ8VEJ9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.79■□□□□ 0.76
Vps4aQ8VEJ9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.79■□□□□ 0.76
Vps4aQ8VEJ9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms