Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Upb1Q8VC97 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Upb1Q8VC97 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Upb1Q8VC97 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Upb1Q8VC97 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.51■■□□□ 1.19
Upb1Q8VC97 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upb1Q8VC97 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Upb1Q8VC97 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Upb1Q8VC97 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.5■■□□□ 1.19
Upb1Q8VC97 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Upb1Q8VC97 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Upb1Q8VC97 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.48■■□□□ 1.19
Upb1Q8VC97 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.47■■□□□ 1.19
Upb1Q8VC97 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Upb1Q8VC97 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Upb1Q8VC97 Gm15039-201ENSMUST00000118914 875 ntBASIC22.46■■□□□ 1.19
Upb1Q8VC97 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Upb1Q8VC97 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.46■■□□□ 1.19
Upb1Q8VC97 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Upb1Q8VC97 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.46■■□□□ 1.19
Upb1Q8VC97 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.46■■□□□ 1.19
Upb1Q8VC97 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Upb1Q8VC97 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Upb1Q8VC97 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Upb1Q8VC97 Gm12821-201ENSMUST00000120022 600 ntBASIC22.45■■□□□ 1.18
Upb1Q8VC97 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Upb1Q8VC97 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Upb1Q8VC97 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.45■■□□□ 1.18
Upb1Q8VC97 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.45■■□□□ 1.18
Upb1Q8VC97 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.45■■□□□ 1.18
Upb1Q8VC97 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.45■■□□□ 1.18
Upb1Q8VC97 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Upb1Q8VC97 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Upb1Q8VC97 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Upb1Q8VC97 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Upb1Q8VC97 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upb1Q8VC97 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Upb1Q8VC97 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Upb1Q8VC97 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upb1Q8VC97 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upb1Q8VC97 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upb1Q8VC97 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms