Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3kbp1Q8R550 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3kbp1Q8R550 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3kbp1Q8R550 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sh3kbp1Q8R550 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3kbp1Q8R550 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.23■□□□□ 0.99
Sh3kbp1Q8R550 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 Gm12922-201ENSMUST00000120626 809 ntBASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3kbp1Q8R550 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3kbp1Q8R550 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.21■□□□□ 0.99
Sh3kbp1Q8R550 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.21■□□□□ 0.99
Sh3kbp1Q8R550 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh3kbp1Q8R550 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3kbp1Q8R550 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3kbp1Q8R550 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3kbp1Q8R550 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3kbp1Q8R550 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sh3kbp1Q8R550 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3kbp1Q8R550 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3kbp1Q8R550 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms