Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdt1Q8R4E9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdt1Q8R4E9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdt1Q8R4E9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdt1Q8R4E9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdt1Q8R4E9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdt1Q8R4E9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Cdt1Q8R4E9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdt1Q8R4E9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.88■□□□□ 0.77
Cdt1Q8R4E9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.87■□□□□ 0.77
Cdt1Q8R4E9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdt1Q8R4E9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdt1Q8R4E9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.84■□□□□ 0.77
Cdt1Q8R4E9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cdt1Q8R4E9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cdt1Q8R4E9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdt1Q8R4E9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdt1Q8R4E9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdt1Q8R4E9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdt1Q8R4E9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms