Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slf1Q8R3P9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slf1Q8R3P9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slf1Q8R3P9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.76■□□□□ 0.91
Slf1Q8R3P9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Slf1Q8R3P9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Slf1Q8R3P9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slf1Q8R3P9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slf1Q8R3P9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slf1Q8R3P9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slf1Q8R3P9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slf1Q8R3P9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Slf1Q8R3P9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slf1Q8R3P9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slf1Q8R3P9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.71■□□□□ 0.91
Slf1Q8R3P9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.71■□□□□ 0.91
Slf1Q8R3P9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Slf1Q8R3P9 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.71■□□□□ 0.91
Slf1Q8R3P9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slf1Q8R3P9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Slf1Q8R3P9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Slf1Q8R3P9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Slf1Q8R3P9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Slf1Q8R3P9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slf1Q8R3P9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.67■□□□□ 0.9
Slf1Q8R3P9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slf1Q8R3P9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms