Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Ptcd2Q8R3K3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptcd2Q8R3K3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptcd2Q8R3K3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Ptcd2Q8R3K3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ptcd2Q8R3K3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptcd2Q8R3K3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ptcd2Q8R3K3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptcd2Q8R3K3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.14■■□□□ 1.13
Ptcd2Q8R3K3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
Ptcd2Q8R3K3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptcd2Q8R3K3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptcd2Q8R3K3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ptcd2Q8R3K3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptcd2Q8R3K3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptcd2Q8R3K3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.11■■□□□ 1.13
Ptcd2Q8R3K3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptcd2Q8R3K3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.1■■□□□ 1.13
Ptcd2Q8R3K3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptcd2Q8R3K3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Ptcd2Q8R3K3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptcd2Q8R3K3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ptcd2Q8R3K3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC22.08■■□□□ 1.13
Ptcd2Q8R3K3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.08■■□□□ 1.13
Ptcd2Q8R3K3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptcd2Q8R3K3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ptcd2Q8R3K3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Ptcd2Q8R3K3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ptcd2Q8R3K3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ptcd2Q8R3K3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptcd2Q8R3K3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptcd2Q8R3K3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ptcd2Q8R3K3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ptcd2Q8R3K3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptcd2Q8R3K3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.05■■□□□ 1.12
Ptcd2Q8R3K3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptcd2Q8R3K3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptcd2Q8R3K3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.04■■□□□ 1.12
Ptcd2Q8R3K3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptcd2Q8R3K3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ptcd2Q8R3K3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.04■■□□□ 1.12
Ptcd2Q8R3K3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptcd2Q8R3K3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptcd2Q8R3K3 Gm4968-201ENSMUST00000071458 858 ntBASIC22.03■■□□□ 1.12
Ptcd2Q8R3K3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptcd2Q8R3K3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptcd2Q8R3K3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms