Protein–RNA interactions for Protein: Q8K297

Colgalt1, Procollagen galactosyltransferase 1, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colgalt1Q8K297 Mir7075-201ENSMUST00000184187 82 ntBASIC22.32■■□□□ 1.16
Colgalt1Q8K297 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Colgalt1Q8K297 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Colgalt1Q8K297 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Colgalt1Q8K297 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Colgalt1Q8K297 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Colgalt1Q8K297 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Colgalt1Q8K297 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Colgalt1Q8K297 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Colgalt1Q8K297 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Colgalt1Q8K297 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Colgalt1Q8K297 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.29■■□□□ 1.16
Colgalt1Q8K297 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.29■■□□□ 1.16
Colgalt1Q8K297 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.29■■□□□ 1.16
Colgalt1Q8K297 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Gm43017-201ENSMUST00000198296 752 ntBASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Colgalt1Q8K297 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Colgalt1Q8K297 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
Colgalt1Q8K297 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Colgalt1Q8K297 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Colgalt1Q8K297 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Colgalt1Q8K297 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Colgalt1Q8K297 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.23■■□□□ 1.15
Colgalt1Q8K297 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.23■■□□□ 1.15
Colgalt1Q8K297 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Colgalt1Q8K297 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Colgalt1Q8K297 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms