Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtn4rl1Q8K0S5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
Rtn4rl1Q8K0S5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4rl1Q8K0S5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4rl1Q8K0S5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4rl1Q8K0S5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rtn4rl1Q8K0S5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.2■□□□□ 0.98
Rtn4rl1Q8K0S5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtn4rl1Q8K0S5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtn4rl1Q8K0S5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Gm29257-201ENSMUST00000186115 639 ntBASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtn4rl1Q8K0S5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rtn4rl1Q8K0S5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtn4rl1Q8K0S5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rtn4rl1Q8K0S5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtn4rl1Q8K0S5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4rl1Q8K0S5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4rl1Q8K0S5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rtn4rl1Q8K0S5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm43530-201ENSMUST00000195920 274 ntBASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Rtn4rl1Q8K0S5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtn4rl1Q8K0S5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4rl1Q8K0S5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.12■□□□□ 0.97
Rtn4rl1Q8K0S5 Spcs1-204ENSMUST00000226782 949 ntBASIC21.12■□□□□ 0.97
Rtn4rl1Q8K0S5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rtn4rl1Q8K0S5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.11■□□□□ 0.97
Rtn4rl1Q8K0S5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rtn4rl1Q8K0S5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtn4rl1Q8K0S5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rtn4rl1Q8K0S5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtn4rl1Q8K0S5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm26833-201ENSMUST00000180899 440 ntBASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.09■□□□□ 0.97
Rtn4rl1Q8K0S5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtn4rl1Q8K0S5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rtn4rl1Q8K0S5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.08■□□□□ 0.97
Rtn4rl1Q8K0S5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms