Protein–RNA interactions for Protein: Q8CFE2

Hpf1, Histone PARylation factor 1, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hpf1Q8CFE2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hpf1Q8CFE2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.22■□□□□ 0.67
Hpf1Q8CFE2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hpf1Q8CFE2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Hpf1Q8CFE2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hpf1Q8CFE2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hpf1Q8CFE2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hpf1Q8CFE2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hpf1Q8CFE2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hpf1Q8CFE2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hpf1Q8CFE2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hpf1Q8CFE2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hpf1Q8CFE2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hpf1Q8CFE2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hpf1Q8CFE2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hpf1Q8CFE2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hpf1Q8CFE2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hpf1Q8CFE2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hpf1Q8CFE2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms