Protein–RNA interactions for Protein: Q8CBY1

Samd4a, Protein Smaug homolog 1, mousemouse

Known RBP Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd4aQ8CBY1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.2■□□□□ 0.82
Samd4aQ8CBY1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Samd4aQ8CBY1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd4aQ8CBY1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samd4aQ8CBY1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.18■□□□□ 0.82
Samd4aQ8CBY1 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.18■□□□□ 0.82
Samd4aQ8CBY1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samd4aQ8CBY1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Samd4aQ8CBY1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samd4aQ8CBY1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Samd4aQ8CBY1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Samd4aQ8CBY1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Samd4aQ8CBY1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samd4aQ8CBY1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Samd4aQ8CBY1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Samd4aQ8CBY1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Samd4aQ8CBY1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samd4aQ8CBY1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Samd4aQ8CBY1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Samd4aQ8CBY1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Samd4aQ8CBY1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.09■□□□□ 0.81
Samd4aQ8CBY1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms