Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska3Q8C263 Gm7417-201ENSMUST00000192950 473 ntBASIC19.41■□□□□ 0.7
Ska3Q8C263 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.41■□□□□ 0.7
Ska3Q8C263 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska3Q8C263 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska3Q8C263 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ska3Q8C263 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ska3Q8C263 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska3Q8C263 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska3Q8C263 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska3Q8C263 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.4■□□□□ 0.7
Ska3Q8C263 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ska3Q8C263 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Ska3Q8C263 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska3Q8C263 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska3Q8C263 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.39■□□□□ 0.69
Ska3Q8C263 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska3Q8C263 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska3Q8C263 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska3Q8C263 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska3Q8C263 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska3Q8C263 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ska3Q8C263 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska3Q8C263 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Ska3Q8C263 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Ska3Q8C263 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ska3Q8C263 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.37■□□□□ 0.69
Ska3Q8C263 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ska3Q8C263 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska3Q8C263 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ska3Q8C263 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska3Q8C263 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska3Q8C263 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.35■□□□□ 0.69
Ska3Q8C263 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska3Q8C263 Gm14117-201ENSMUST00000122417 843 ntBASIC19.35■□□□□ 0.69
Ska3Q8C263 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ska3Q8C263 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.35■□□□□ 0.69
Ska3Q8C263 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ska3Q8C263 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Ska3Q8C263 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska3Q8C263 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
Ska3Q8C263 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.34■□□□□ 0.69
Ska3Q8C263 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.34■□□□□ 0.69
Ska3Q8C263 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska3Q8C263 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ska3Q8C263 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.33■□□□□ 0.69
Ska3Q8C263 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ska3Q8C263 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.33■□□□□ 0.68
Ska3Q8C263 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.33■□□□□ 0.68
Ska3Q8C263 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ska3Q8C263 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ska3Q8C263 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.32■□□□□ 0.68
Ska3Q8C263 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ska3Q8C263 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska3Q8C263 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.31■□□□□ 0.68
Ska3Q8C263 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska3Q8C263 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ska3Q8C263 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.3■□□□□ 0.68
Ska3Q8C263 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ska3Q8C263 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms