Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Gm40881-201ENSMUST00000223397 166 ntBASIC19.3■□□□□ 0.68
Cpne1Q8C166 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.3■□□□□ 0.68
Cpne1Q8C166 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne1Q8C166 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cpne1Q8C166 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.29■□□□□ 0.68
Cpne1Q8C166 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Etf1-202ENSMUST00000180351 108 ntBASIC19.28■□□□□ 0.68
Cpne1Q8C166 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cpne1Q8C166 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cpne1Q8C166 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.27■□□□□ 0.68
Cpne1Q8C166 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cpne1Q8C166 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cpne1Q8C166 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpne1Q8C166 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Rps24-207ENSMUST00000224568 714 ntBASIC19.25■□□□□ 0.67
Cpne1Q8C166 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpne1Q8C166 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpne1Q8C166 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Gm14117-201ENSMUST00000122417 843 ntBASIC19.23■□□□□ 0.67
Cpne1Q8C166 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Gm45102-201ENSMUST00000207427 857 ntBASIC19.23■□□□□ 0.67
Cpne1Q8C166 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cpne1Q8C166 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpne1Q8C166 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Gm7417-201ENSMUST00000192950 473 ntBASIC19.22■□□□□ 0.67
Cpne1Q8C166 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Cpne1Q8C166 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpne1Q8C166 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cpne1Q8C166 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms