Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tnfsfm13Q8BXS2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfsfm13Q8BXS2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm5921-201ENSMUST00000075898 882 ntBASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfsfm13Q8BXS2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.35■□□□□ 0.53
Tnfsfm13Q8BXS2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfsfm13Q8BXS2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfsfm13Q8BXS2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tnfsfm13Q8BXS2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfsfm13Q8BXS2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Tnfsfm13Q8BXS2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsfm13Q8BXS2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.32■□□□□ 0.52
Tnfsfm13Q8BXS2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsfm13Q8BXS2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tnfsfm13Q8BXS2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfsfm13Q8BXS2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tnfsfm13Q8BXS2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfsfm13Q8BXS2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfsfm13Q8BXS2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms