Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.96■□□□□ 0.95
Sfr1Q8BP27 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sfr1Q8BP27 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sfr1Q8BP27 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sfr1Q8BP27 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sfr1Q8BP27 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sfr1Q8BP27 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sfr1Q8BP27 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sfr1Q8BP27 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sfr1Q8BP27 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sfr1Q8BP27 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sfr1Q8BP27 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sfr1Q8BP27 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sfr1Q8BP27 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sfr1Q8BP27 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sfr1Q8BP27 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sfr1Q8BP27 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sfr1Q8BP27 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.9■□□□□ 0.94
Sfr1Q8BP27 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sfr1Q8BP27 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sfr1Q8BP27 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sfr1Q8BP27 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sfr1Q8BP27 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.89■□□□□ 0.93
Sfr1Q8BP27 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sfr1Q8BP27 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.89■□□□□ 0.93
Sfr1Q8BP27 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sfr1Q8BP27 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sfr1Q8BP27 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Sfr1Q8BP27 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sfr1Q8BP27 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sfr1Q8BP27 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sfr1Q8BP27 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sfr1Q8BP27 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sfr1Q8BP27 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Gm22238-201ENSMUST00000175222 88 ntBASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sfr1Q8BP27 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sfr1Q8BP27 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sfr1Q8BP27 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms