Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdh20Q8BIZ0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.05■□□□□ 0.8
Pcdh20Q8BIZ0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdh20Q8BIZ0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Gm10232-201ENSMUST00000089221 720 ntBASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh20Q8BIZ0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh20Q8BIZ0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pcdh20Q8BIZ0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh20Q8BIZ0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh20Q8BIZ0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh20Q8BIZ0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh20Q8BIZ0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh20Q8BIZ0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh20Q8BIZ0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh20Q8BIZ0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh20Q8BIZ0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh20Q8BIZ0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Pcdh20Q8BIZ0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh20Q8BIZ0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh20Q8BIZ0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh20Q8BIZ0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh20Q8BIZ0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh20Q8BIZ0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh20Q8BIZ0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh20Q8BIZ0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh20Q8BIZ0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms