Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab39aQ8BHD0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab39aQ8BHD0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab39aQ8BHD0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab39aQ8BHD0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab39aQ8BHD0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab39aQ8BHD0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab39aQ8BHD0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Rab39aQ8BHD0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab39aQ8BHD0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab39aQ8BHD0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab39aQ8BHD0 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab39aQ8BHD0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab39aQ8BHD0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab39aQ8BHD0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab39aQ8BHD0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rab39aQ8BHD0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab39aQ8BHD0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab39aQ8BHD0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab39aQ8BHD0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab39aQ8BHD0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.83■□□□□ 0.61
Rab39aQ8BHD0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab39aQ8BHD0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab39aQ8BHD0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab39aQ8BHD0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.83■□□□□ 0.6
Rab39aQ8BHD0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab39aQ8BHD0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab39aQ8BHD0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms