Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prdm4Q80V63 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Prdm4Q80V63 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.28■■□□□ 1
Prdm4Q80V63 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Prdm4Q80V63 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prdm4Q80V63 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prdm4Q80V63 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prdm4Q80V63 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.27■■□□□ 1
Prdm4Q80V63 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prdm4Q80V63 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prdm4Q80V63 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.26■□□□□ 0.99
Prdm4Q80V63 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.25■□□□□ 0.99
Prdm4Q80V63 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Prdm4Q80V63 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prdm4Q80V63 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prdm4Q80V63 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Prdm4Q80V63 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm4Q80V63 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm4Q80V63 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.21■□□□□ 0.99
Prdm4Q80V63 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm4Q80V63 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Prdm4Q80V63 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Prdm4Q80V63 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.2■□□□□ 0.98
Prdm4Q80V63 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Gm22567-201ENSMUST00000175542 342 ntBASIC21.19■□□□□ 0.98
Prdm4Q80V63 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Prdm4Q80V63 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm4Q80V63 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Prdm4Q80V63 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm4Q80V63 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm4Q80V63 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms