Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpp38Q80UU2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.75■□□□□ 0.91
Rpp38Q80UU2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpp38Q80UU2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rpp38Q80UU2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Rpp38Q80UU2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpp38Q80UU2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpp38Q80UU2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.71■□□□□ 0.91
Rpp38Q80UU2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpp38Q80UU2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Rpp38Q80UU2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.69■□□□□ 0.9
Rpp38Q80UU2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Gm9959-201ENSMUST00000068277 390 ntBASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpp38Q80UU2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rpp38Q80UU2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp38Q80UU2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.68■□□□□ 0.9
Rpp38Q80UU2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp38Q80UU2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp38Q80UU2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpp38Q80UU2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpp38Q80UU2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp38Q80UU2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpp38Q80UU2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp38Q80UU2 Etf1-202ENSMUST00000180351 108 ntBASIC20.66■□□□□ 0.9
Rpp38Q80UU2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp38Q80UU2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpp38Q80UU2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.65■□□□□ 0.9
Rpp38Q80UU2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rpp38Q80UU2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rpp38Q80UU2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp38Q80UU2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp38Q80UU2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpp38Q80UU2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rpp38Q80UU2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms