Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubfd1Q78JW9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubfd1Q78JW9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ubfd1Q78JW9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ubfd1Q78JW9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.17■□□□□ 0.82
Ubfd1Q78JW9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubfd1Q78JW9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubfd1Q78JW9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubfd1Q78JW9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Gm27454-201ENSMUST00000185090 204 ntBASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubfd1Q78JW9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubfd1Q78JW9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ubfd1Q78JW9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubfd1Q78JW9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubfd1Q78JW9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubfd1Q78JW9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.11■□□□□ 0.81
Ubfd1Q78JW9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubfd1Q78JW9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubfd1Q78JW9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubfd1Q78JW9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ubfd1Q78JW9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 313 ms