Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Commd3Q63829 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.15■□□□□ 0.34
Commd3Q63829 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Commd3Q63829 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Commd3Q63829 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Commd3Q63829 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Commd3Q63829 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
Commd3Q63829 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.14■□□□□ 0.33
Commd3Q63829 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Commd3Q63829 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Commd3Q63829 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Commd3Q63829 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Commd3Q63829 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Commd3Q63829 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Commd3Q63829 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Commd3Q63829 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Commd3Q63829 Gm45364-201ENSMUST00000210883 159 ntBASIC17.13■□□□□ 0.33
Commd3Q63829 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Commd3Q63829 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Commd3Q63829 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.13■□□□□ 0.33
Commd3Q63829 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Commd3Q63829 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.12■□□□□ 0.33
Commd3Q63829 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.12■□□□□ 0.33
Commd3Q63829 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Commd3Q63829 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Commd3Q63829 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Commd3Q63829 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Commd3Q63829 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Commd3Q63829 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.11■□□□□ 0.33
Commd3Q63829 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Commd3Q63829 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Commd3Q63829 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Commd3Q63829 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Commd3Q63829 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.1■□□□□ 0.33
Commd3Q63829 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Commd3Q63829 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Commd3Q63829 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Commd3Q63829 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Commd3Q63829 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Commd3Q63829 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Commd3Q63829 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Commd3Q63829 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Commd3Q63829 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Commd3Q63829 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Commd3Q63829 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Commd3Q63829 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Commd3Q63829 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Commd3Q63829 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.08■□□□□ 0.32
Commd3Q63829 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Commd3Q63829 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Commd3Q63829 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.08■□□□□ 0.32
Commd3Q63829 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Commd3Q63829 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Commd3Q63829 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Commd3Q63829 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Commd3Q63829 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Commd3Q63829 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Commd3Q63829 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Commd3Q63829 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Commd3Q63829 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
Commd3Q63829 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms