Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SspnQ62147 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SspnQ62147 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SspnQ62147 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
SspnQ62147 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SspnQ62147 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.17■□□□□ 0.34
SspnQ62147 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.17■□□□□ 0.34
SspnQ62147 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SspnQ62147 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SspnQ62147 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SspnQ62147 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.16■□□□□ 0.34
SspnQ62147 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SspnQ62147 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SspnQ62147 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SspnQ62147 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.15■□□□□ 0.34
SspnQ62147 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SspnQ62147 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SspnQ62147 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SspnQ62147 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SspnQ62147 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SspnQ62147 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SspnQ62147 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SspnQ62147 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SspnQ62147 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SspnQ62147 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SspnQ62147 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.13■□□□□ 0.33
SspnQ62147 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.13■□□□□ 0.33
SspnQ62147 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SspnQ62147 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.12■□□□□ 0.33
SspnQ62147 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.12■□□□□ 0.33
SspnQ62147 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.12■□□□□ 0.33
SspnQ62147 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SspnQ62147 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SspnQ62147 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.12■□□□□ 0.33
SspnQ62147 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SspnQ62147 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SspnQ62147 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SspnQ62147 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SspnQ62147 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SspnQ62147 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.11■□□□□ 0.33
SspnQ62147 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.11■□□□□ 0.33
SspnQ62147 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SspnQ62147 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
SspnQ62147 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SspnQ62147 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SspnQ62147 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SspnQ62147 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
SspnQ62147 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SspnQ62147 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SspnQ62147 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SspnQ62147 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SspnQ62147 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SspnQ62147 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.09■□□□□ 0.33
SspnQ62147 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SspnQ62147 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SspnQ62147 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SspnQ62147 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SspnQ62147 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SspnQ62147 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
SspnQ62147 Gm45444-201ENSMUST00000211394 898 ntBASIC17.08■□□□□ 0.32
SspnQ62147 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.08■□□□□ 0.32
SspnQ62147 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.08■□□□□ 0.32
SspnQ62147 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms