Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Rai1Q61818 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rai1Q61818 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rai1Q61818 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rai1Q61818 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rai1Q61818 Gm8493-201ENSMUST00000196881 489 ntBASIC20.32■□□□□ 0.84
Rai1Q61818 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rai1Q61818 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rai1Q61818 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rai1Q61818 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
Rai1Q61818 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rai1Q61818 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rai1Q61818 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rai1Q61818 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rai1Q61818 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rai1Q61818 Gm29257-201ENSMUST00000186115 639 ntBASIC20.3■□□□□ 0.84
Rai1Q61818 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rai1Q61818 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rai1Q61818 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rai1Q61818 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rai1Q61818 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rai1Q61818 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rai1Q61818 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rai1Q61818 Spcs1-204ENSMUST00000226782 949 ntBASIC20.28■□□□□ 0.84
Rai1Q61818 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rai1Q61818 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rai1Q61818 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.27■□□□□ 0.84
Rai1Q61818 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rai1Q61818 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.27■□□□□ 0.84
Rai1Q61818 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rai1Q61818 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rai1Q61818 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rai1Q61818 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rai1Q61818 Gm43530-201ENSMUST00000195920 274 ntBASIC20.26■□□□□ 0.83
Rai1Q61818 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.26■□□□□ 0.83
Rai1Q61818 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rai1Q61818 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rai1Q61818 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rai1Q61818 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.26■□□□□ 0.83
Rai1Q61818 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rai1Q61818 Gm26571-201ENSMUST00000181399 666 ntBASIC20.26■□□□□ 0.83
Rai1Q61818 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rai1Q61818 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rai1Q61818 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rai1Q61818 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.24■□□□□ 0.83
Rai1Q61818 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rai1Q61818 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rai1Q61818 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rai1Q61818 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rai1Q61818 Gm5874-201ENSMUST00000096101 508 ntBASIC20.24■□□□□ 0.83
Rai1Q61818 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rai1Q61818 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rai1Q61818 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rai1Q61818 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rai1Q61818 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rai1Q61818 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Rai1Q61818 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.22■□□□□ 0.83
Rai1Q61818 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rai1Q61818 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rai1Q61818 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rai1Q61818 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rai1Q61818 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rai1Q61818 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.21■□□□□ 0.83
Rai1Q61818 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.21■□□□□ 0.83
Rai1Q61818 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rai1Q61818 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rai1Q61818 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.2■□□□□ 0.82
Rai1Q61818 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.2■□□□□ 0.82
Rai1Q61818 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rai1Q61818 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.2■□□□□ 0.82
Rai1Q61818 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
Rai1Q61818 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rai1Q61818 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rai1Q61818 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.19■□□□□ 0.82
Rai1Q61818 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rai1Q61818 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rai1Q61818 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rai1Q61818 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.18■□□□□ 0.82
Rai1Q61818 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rai1Q61818 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms