Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf4Q61382 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf4Q61382 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf4Q61382 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.16■□□□□ 0.5
Traf4Q61382 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Traf4Q61382 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Traf4Q61382 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf4Q61382 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf4Q61382 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Traf4Q61382 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Traf4Q61382 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf4Q61382 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Traf4Q61382 Gm40881-201ENSMUST00000223397 166 ntBASIC18.15■□□□□ 0.5
Traf4Q61382 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Traf4Q61382 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Traf4Q61382 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Traf4Q61382 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Traf4Q61382 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Traf4Q61382 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Traf4Q61382 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf4Q61382 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf4Q61382 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Traf4Q61382 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Traf4Q61382 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Traf4Q61382 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Traf4Q61382 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.14■□□□□ 0.49
Traf4Q61382 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.13■□□□□ 0.49
Traf4Q61382 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.13■□□□□ 0.49
Traf4Q61382 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Traf4Q61382 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Traf4Q61382 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf4Q61382 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Traf4Q61382 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
Traf4Q61382 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.12■□□□□ 0.49
Traf4Q61382 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.12■□□□□ 0.49
Traf4Q61382 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.12■□□□□ 0.49
Traf4Q61382 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.12■□□□□ 0.49
Traf4Q61382 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf4Q61382 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Traf4Q61382 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.11■□□□□ 0.49
Traf4Q61382 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.11■□□□□ 0.49
Traf4Q61382 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Traf4Q61382 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.1■□□□□ 0.49
Traf4Q61382 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Traf4Q61382 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.09■□□□□ 0.49
Traf4Q61382 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Traf4Q61382 Gm10399-202ENSMUST00000202768 748 ntBASIC18.09■□□□□ 0.49
Traf4Q61382 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Traf4Q61382 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.09■□□□□ 0.49
Traf4Q61382 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.08■□□□□ 0.49
Traf4Q61382 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Traf4Q61382 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Traf4Q61382 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Traf4Q61382 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.08■□□□□ 0.49
Traf4Q61382 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Traf4Q61382 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Traf4Q61382 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Traf4Q61382 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Traf4Q61382 Gm22238-201ENSMUST00000175222 88 ntBASIC18.08■□□□□ 0.48
Traf4Q61382 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Traf4Q61382 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Traf4Q61382 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Traf4Q61382 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Traf4Q61382 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Traf4Q61382 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Traf4Q61382 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
Traf4Q61382 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Traf4Q61382 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms